EDITORIALS:

Mark Hermodson

Thank You, Steve Bryant, and Welcome, Carol Post!
Protein Sci 2005 14: 277. [Full Text]  

REVIEWS:

Joël Janin

Assessing predictions of protein–protein interaction: The CAPRI experiment
Protein Sci 2005 14: 278-283. [Abstract] [Full Text]  

ARTICLES:

Jonathan D. Dattelbaum, Loren L. Looger, David E. Benson, Kevin M. Sali, Richard B. Thompson, and Homme W. Hellinga

Analysis of allosteric signal transduction mechanisms in an engineered fluorescent maltose biosensor
Protein Sci 2005 14: 284-291. [Abstract] [Full Text]  

Frédéric De Lemos Esteves, Thierry Gouders, Josette Lamotte-Brasseur, Sébastien Rigali, and Jean-Marie Frère

Improving the alkalophilic performances of the Xyl1 xylanase from Streptomyces sp. S38: Structural comparison and mutational analysis
Protein Sci 2005 14: 292-302. [Abstract] [Full Text]  

Erick K. Dufour, Antoine Désilets, Jean-Michel Longpré, and Richard Leduc

Stability of mutant serpin/furin complexes: Dependence on pH and regulation at the deacylation step
Protein Sci 2005 14: 303-315. [Abstract] [Full Text]  

Yuhua Duan, Boojala V.B. Reddy, and Yiannis N. Kaznessis

Physicochemical and residue conservation calculations to improve the ranking of protein–protein docking solutions
Protein Sci 2005 14: 316-328. [Abstract] [Full Text]  

Jonas Fast, Ann-Kristin Mossberg, Catharina Svanborg, and Sara Linse

Stability of HAMLET—A kinetically trapped -lactalbumin oleic acid complex
Protein Sci 2005 14: 329-340. [Abstract] [Full Text]  

Masahiro Furutani, Jun-Ichi Hata, Yasuhito Shomura, Keisuke Itami, Takao Yoshida, Yoshitaka Izumoto, Akiko Togi, Akira Ideno, Takuo Yasunaga, Kunio Miki, and Tadashi Maruyama

An engineered chaperonin caging a guest protein: Structural insights and potential as a protein expression tool
Protein Sci 2005 14: 341-350. [Abstract] [Full Text]  

Jaewon Kim, Jihun Lee, Stephen R. Brych, Timothy M. Logan, and Michael Blaber

Sequence swapping does not result in conformation swapping for the 4/5 and 8/9 -hairpin turns in human acidic fibroblast growth factor
Protein Sci 2005 14: 351-359. Published in Advance January 4, 2005, 10.1110/ps.041094205 [Abstract] [Full Text]  

Lisa N. Kinch, Sara Cheek, and Nick V. Grishin

EDD, a novel phosphotransferase domain common to mannose transporter EIIA, dihydroxyacetone kinase, and DegV
Protein Sci 2005 14: 360-367. Published in Advance January 4, 2005, 10.1110/ps.041114805 [Abstract] [Full Text]  

Andrew J. Miles, Lee Whitmore, and B.A. Wallace

Spectral magnitude effects on the analyses of secondary structure from circular dichroism spectroscopic data
Protein Sci 2005 14: 368-374. [Abstract] [Full Text]  

Nelly Morellet, Sabine Druillennec, Christine Lenoir, Serge Bouaziz, and Bernard P. Roques

Helical structure determined by NMR of the HIV-1 (345–392)Gag sequence, surrounding p2: Implications for particle assembly and RNA packaging
Protein Sci 2005 14: 375-386. [Abstract] [Full Text]  

Inés G. Muñoz, Jose F. Moran, Manuel Becana, and Guillermo Montoya

The crystal structure of an eukaryotic iron superoxide dismutase suggests intersubunit cooperation during catalysis
Protein Sci 2005 14: 387-394. [Abstract] [Full Text] [Supplemental Research Data]  

Garima Singh, Jayasankar Jasti, K. Saravanan, Sujata Sharma, Punit Kaur, A. Srinivasan, and Tej P. Singh

Crystal structure of the complex formed between a group I Phospholipase A₂ and a naturally occurring fatty acid at 2.7 Å resolution
Protein Sci 2005 14: 395-400. [Abstract] [Full Text]  

Derek J. Taylor and John E. Johnson

Folding and particle assembly are disrupted by single-point mutations near the autocatalytic cleavage site of Nudaurelia capensis virus capsid protein
Protein Sci 2005 14: 401-408. [Abstract] [Full Text]  

Sachiko Toma, Khoon Tee Chong, Atsushi Nakagawa, Katsunori Teranishi, Satoshi Inouye, and Osamu Shimomura

The crystal structures of semi-synthetic aequorins
Protein Sci 2005 14: 409-416. Published in Advance January 4, 2005, 10.1110/ps.041067805 [Abstract] [Full Text]  

Itai Yanai, Yong Yu, Xiahui Zhu, Charles R. Cantor, and Zhiping Weng

An avidin-like domain that does not bind biotin is adopted for oligomerization by the extracellular mosaic protein fibropellin
Protein Sci 2005 14: 417-423. [Abstract] [Full Text]  

Deok Cheon Yeh, Lisa M. Parsons, James F. Parsons, Fang Liu, Edward Eisenstein, and John Orban

NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae, and comparison with the X-ray structure of an Aquifex aeolicus homolog
Protein Sci 2005 14: 424-430. Published in Advance January 4, 2005, 10.1110/ps.041096705 [Abstract] [Full Text]  

Ziding Zhang, Sunil Kochhar, and Martin G. Grigorov

Descriptor-based protein remote homology identification
Protein Sci 2005 14: 431-444. Published in Advance January 4, 2005, 10.1110/ps.041035505 [Abstract] [Full Text] [Supplemental Research Data]  

Iveta Bártová, Michal Otyepka, Zdenek KrÍz, and Jaroslav Koca

The mechanism of inhibition of the cyclin-dependent kinase-2 as revealed by the molecular dynamics study on the complex CDK2 with the peptide substrate HHASPRK
Protein Sci 2005 14: 445-451. Published in Advance January 4, 2005, 10.1110/ps.04959705 [Abstract] [Full Text]  

Jason J. Cournoyer, Jason L. Pittman, Vera B. Ivleva, Eric Fallows, Lucy Waskell, Catherine E. Costello, and Peter B. O’Connor

Deamidation: Differentiation of aspartyl from isoaspartyl products in peptides by electron capture dissociation
Protein Sci 2005 14: 452-463. [Abstract] [Full Text]  

Hernando Curtidor, Luis E. Rodríguez, Marisol Ocampo, Ramses López, Javier E. García, John Valbuena, Ricardo Vera, Álvaro Puentes, Magnolia Vanegas, and Manuel E. Patarroyo

Specific erythrocyte binding capacity and biological activity of Plasmodium falciparum erythrocyte binding ligand 1 (EBL-1)-derived peptides
Protein Sci 2005 14: 464-473. [Abstract] [Full Text]  

Gerald R.S. Hartig, Tran T. Tran, and Mark L. Smythe

Intramolecular disulphide bond arrangements in nonhomologous proteins
Protein Sci 2005 14: 474-482. [Abstract] [Full Text] [Supplemental Research Data]  

Elena V. Kudryashova, Antonie J.W.G. Visser, and Harmen H.J. De Jongh

Reversible self-association of ovalbumin at air–water interfaces and the consequences for the exerted surface pressure
Protein Sci 2005 14: 483-493. [Abstract] [Full Text]  

Mamoru Matsubara, Tao Jing, Kumi Kawamura, Naoshi Shimojo, Koiti Titani, Keiichiro Hashimoto, and Nobuhiro Hayashi

Myristoyl moiety of HIV Nef is involved in regulation of the interaction with calmodulin in vivo
Protein Sci 2005 14: 494-503. Published in Advance January 4, 2005, 10.1110/ps.04969605 [Abstract] [Full Text]  

Marisol Ocampo, Luis E. Rodríguez, Hernando Curtidor, Álvaro Puentes, Ricardo Vera, John J. Valbuena, Ramses López, Javier E. García, Luis E. Ramírez, Elizabeth Torres, Jimena Cortes, Diana Tovar, Yolanda López, Manuel A. Patarroyo, and Manuel E. Patarroyo

Identifying Plasmodium falciparum cytoadherence-linked asexual protein 3 (CLAG 3) sequences that specifically bind to C32 cells and erythrocytes
Protein Sci 2005 14: 504-513. [Abstract] [Full Text]  

Brandon J. Placek, L. Nicole Harrison, Brooke M. Villers, and Lisa M. Gloss

The H2A.Z/H2B dimer is unstable compared to the dimer containing the major H2A isoform
Protein Sci 2005 14: 514-522. Published in Advance January 4, 2005, 10.1110/ps.041026405 [Abstract] [Full Text]  

Georgios Skretas and David W. Wood

Regulation of protein activity with small-molecule-controlled inteins
Protein Sci 2005 14: 523-532. Published in Advance January 4, 2005, 10.1110/ps.04996905 [Abstract] [Full Text]  

Lisa D. Tesch, Manikanahally P. Raghavendra, Tina Bedsted-Faarvang, Peter G.W. Gettins, and Steven T. Olson

Specificity and reactive loop length requirements for crmA inhibition of serine proteases
Protein Sci 2005 14: 533-542. Published in Advance January 4, 2005, 10.1110/ps.041104905 [Abstract] [Full Text]  

Hui Xiao, Joshua K. Hoerner, Stephen J. Eyles, Andras Dobo, Edward Voigtman, Andre I. Mel’cuk, and Igor A. Kaltashov

Mapping protein energy landscapes with amide hydrogen exchange and mass spectrometry: I. A generalized model for a two-state protein and comparison with experiment
Protein Sci 2005 14: 543-557. [Abstract] [Full Text]  

PROTEIN STRUCTURE REPORTS:

Tomonori Kaneko, Nobuo Tanaka, and Takashi Kumasaka

Crystal structures of RsbQ, a stress-response regulator in Bacillus subtilis
Protein Sci 2005 14: 558-565. Published in Advance January 4, 2005, 10.1110/ps.041170005 [Abstract] [Full Text]  

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