REVIEWS:

Sharon Goldsmith-Fischman and Barry Honig

Structural genomics: Computational methods for structure analysis
Protein Sci 2003 12: 1813-1821. [Abstract] [Full Text]  

ARTICLES:

David M. Anstrom, Karen Kallio, and S. James Remington

Structure of the Escherichia coli malate synthase G:pyruvate:acetyl-coenzyme A abortive ternary complex at 1.95 Å resolution
Protein Sci 2003 12: 1822-1832. [Abstract] [Full Text]  

Sonia L. Bardy, Jerry Eichler, and Ken F. Jarrell

Archaeal signal peptides—A comparative survey at the genome level
Protein Sci 2003 12: 1833-1843. [Abstract] [Full Text] [Supplemental Research Data]  

J. Iñaki Guijarro, Sarrah M’Barek, Froylan Gómez-Lagunas, Damien Garnier, Hervé Rochat, Jean-Marc Sabatier, Lourrival D. Possani, and Muriel Delepierre

Solution structure of Pi4, a short four-disulfide-bridged scorpion toxin specific of potassium channels
Protein Sci 2003 12: 1844-1854. [Abstract] [Full Text] [Supplemental Research Data]  

Tommi Kajander, Lari Lehtiö, Michael Schlömann, and Adrian Goldman

The structure of Pseudomonas P51 Cl-muconate lactonizing enzyme: Co-evolution of structure and dynamics with the dehalogenation function
Protein Sci 2003 12: 1855-1864. [Abstract] [Full Text]  

Katherine A. Kantardjieff and Bernhard Rupp

Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein–nucleic acid complex crystals
Protein Sci 2003 12: 1865-1871. [Abstract] [Full Text]  

Tong Liu, Ana Rojas, Yuzhen Ye, and Adam Godzik

Homology modeling provides insights into the binding mode of the PAAD/DAPIN/pyrin domain, a fourth member of the CARD/DD/DED domain family
Protein Sci 2003 12: 1872-1881. [Abstract] [Full Text]  

Buyong Ma and Ruth Nussinov

Energy landscape and dynamics of the ß-hairpin G peptide and its isomers: Topology and sequences
Protein Sci 2003 12: 1882-1893. [Abstract] [Full Text]  

Jens Erik Nielsen and J. Andrew McCammon

Calculating pKa values in enzyme active sites
Protein Sci 2003 12: 1894-1901. [Abstract] [Full Text]  

Helle Birk Olsen, Melissa R. Leuenberger-Fisher, Webe Kadima, Dan Borchardt, Niels C. Kaarsholm, and Michael F. Dunn

Structural signatures of the complex formed between 3-nitro-4-hydroxybenzoate and the Zn(II)-substituted R₆ insulin hexamer
Protein Sci 2003 12: 1902-1913. [Abstract] [Full Text] [Supplemental Research Data]  

Nikos Pinotsis, Demetres D. Leonidas, Evangelia D. Chrysina, Nikos G. Oikonomakos, and Irene M. Mavridis

The binding of ß- and -cyclodextrins to glycogen phosphorylase b: Kinetic and crystallographic studies
Protein Sci 2003 12: 1914-1924. [Abstract] [Full Text]  

Nadeem Siddiqui, Guennadi Kozlov, Iván D’Orso, Jean-François Trempe, and Kalle Gehring

Solution structure of the C-terminal domain from poly(A)-binding protein in Trypanosoma cruzi: A vegetal PABC domain
Protein Sci 2003 12: 1925-1933. [Abstract] [Full Text]  

Shaneen M. Singh and Diana Murray

Molecular modeling of the membrane targeting of phospholipase C pleckstrin homology domains
Protein Sci 2003 12: 1934-1953. [Abstract] [Full Text]  

Matthew W. Vetting, Steven L. Roderick, Michael Yu, and John S. Blanchard

Crystal structure of mycothiol synthase (Rv0819) from Mycobacterium tuberculosis shows structural homology to the GNAT family of N-acetyltransferases
Protein Sci 2003 12: 1954-1959. [Abstract] [Full Text]  

Scott T.R. Walsh, Liz M. Jevitts, Juliesta E. Sylvester, and Anthony A. Kossiakoff

Site2 binding energetics of the regulatory step of growth hormone–induced receptor homodimerization
Protein Sci 2003 12: 1960-1970. [Abstract] [Full Text]  

Michael P. Williamson, Kazuyuki Akasaka, and Mohamed Refaee

The solution structure of bovine pancreatic trypsin inhibitor at high pressure
Protein Sci 2003 12: 1971-1979. [Abstract] [Full Text] [Supplemental Research Data]  

Kerri M. Zawadzki, Yoshitomo Hamuro, Jack S. Kim, Siv Garrod, David D. Stranz, Susan S. Taylor, and Virgil L. Woods, Jr.

Dissecting interdomain communication within cAPK regulatory subunit type IIß using enhanced amide hydrogen/deuterium exchange mass spectrometry (DXMS)
Protein Sci 2003 12: 1980-1990. [Abstract] [Full Text]  

Jaap Broos, Edi Gabellieri, Esther Biemans-Oldehinkel, and Giovanni B. Strambini

Efficient biosynthetic incorporation of tryptophan and indole analogs in an integral membrane protein
Protein Sci 2003 12: 1991-2000. [Abstract] [Full Text]  

Adrian A. Canutescu, Andrew A. Shelenkov, and Roland L. Dunbrack, Jr.

A graph-theory algorithm for rapid protein side-chain prediction
Protein Sci 2003 12: 2001-2014. [Abstract] [Full Text]  

Keith A. Oberg, Jean-Marie Ruysschaert, and Erik Goormaghtigh

Rationally selected basis proteins: A new approach to selecting proteins for spectroscopic secondary structure analysis
Protein Sci 2003 12: 2015-2031. [Abstract] [Full Text]  

Mark A. DePristo, Paul I.W. de Bakker, Reshma P. Shetty, and Tom L. Blundell

Discrete restraint-based protein modeling and the C-trace problem
Protein Sci 2003 12: 2032-2046. [Abstract] [Full Text]  

Mariana N. Dimitrova, Alan Peterkofsky, and Ann Ginsburg

Opposing effects of phosphoenolpyruvate and pyruvate with Mg²⁺ on the conformational stability and dimerization of phosphotransferase enzyme I from Escherichia coli
Protein Sci 2003 12: 2047-2056. [Abstract] [Full Text]  

Dmitry N. Ivankov, Sergiy O. Garbuzynskiy, Eric Alm, Kevin W. Plaxco, David Baker, and Alexei V. Finkelstein

Contact order revisited: Influence of protein size on the folding rate
Protein Sci 2003 12: 2057-2062. [Abstract] [Full Text]  

Ireneusz Majsterek, Erin McAdams, Eijiro Adachi, Shirish T. Dhume, and Andrzej Fertala

Prospects and limitations of the rational engineering of fibrillar collagens
Protein Sci 2003 12: 2063-2072. [Abstract] [Full Text]  

Karen L. Maxwell, Diane Bona, Chengsong Liu, Cheryl H. Arrowsmith, and Aled M. Edwards

Refolding out of guanidine hydrochloride is an effective approach for high-throughput structural studies of small proteins
Protein Sci 2003 12: 2073-2080. [Abstract] [Full Text]  

Nicolas Sluis-Cremer, Ellis Kempner, and Michael A. Parniak

Structure–activity relationships in HIV-1 reverse transcriptase revealed by radiation target analysis
Protein Sci 2003 12: 2081-2086. [Abstract] [Full Text]  

Hongying Yang and Mary F. Roberts

Phosphohydrolase and transphosphatidylation reactions of two Streptomyces phospholipase D enzymes: Covalent versus noncovalent catalysis
Protein Sci 2003 12: 2087-2098. [Abstract] [Full Text]  

FOR THE RECORD:

James R. Bradford and David R. Westhead

Asymmetric mutation rates at enzyme–inhibitor interfaces: Implications for the protein–protein docking problem
Protein Sci 2003 12: 2099-2103. [Abstract] [Full Text] [Supplemental Research Data]  

Weixia Liu, Jon Rumbley, S. Walter Englander, and A. Joshua Wand

Backbone and side–chain heteronuclear resonance assignments and hyperfine NMR shifts in horse cytochrome c
Protein Sci 2003 12: 2104-2108. [Abstract] [Full Text] [Supplemental Research Data]  

Derek Marsh

Lipid–binding proteins: Structure of the phospholipid ligands
Protein Sci 2003 12: 2109-2117. [Abstract] [Full Text]  

Jyoti Sarin, Gajendra P.S. Raghava, and Pradip K. Chakraborti

Intrinsic contributions of polar amino acid residues toward thermal stability of an ABC–ATPase of mesophilic origin
Protein Sci 2003 12: 2118-2120. [Abstract] [Full Text] [Supplemental Research Data]  

ERRATUM:

Hongyi Zhou and Yaoqi Zhou

CORRECTION
Protein Sci 2003 12: 2121. [Full Text]  

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