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Contents: August 2003, Volume 12, Issue 8   [Index by Author] 
       ACCELERATED COMMUNICATIONS
       ARTICLES
       FOR THE RECORD
       ERRATUM
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ACCELERATED COMMUNICATIONS:

Kengo Kinoshita and Haruki Nakamura
Identification of protein biochemical functions by similarity search using the molecular surface database eF-site
Protein Sci 2003 12: 1589-1595. [Abstract] [Full Text]  

ARTICLES:

Maddalena Collini, Laura D’Alfonso, Henriette Molinari, Laura Ragona, Maddalena Catalano, and Giancarlo Baldini
Competitive binding of fatty acids and the fluorescent probe 1-8-anilinonaphthalene sulfonate to bovine ß-lactoglobulin
Protein Sci 2003 12: 1596-1603. [Abstract] [Full Text]  

Michael A. Farnum, Huafeng Xu, and Dimitris K. Agrafiotis
Exploring the nonlinear geometry of protein homology
Protein Sci 2003 12: 1604-1612. [Abstract] [Full Text]  

Michael D. Finucane and Oleg Jardetzky
Surface plasmon resonance studies of wild-type and AV77 tryptophan repressor resolve ambiguities in super-repressor activity
Protein Sci 2003 12: 1613-1620. [Abstract] [Full Text]  

Noriko Handa, Takaho Terada, Yuki Kamewari, Hiroaki Hamana, Jeremy R.H. Tame, Sam-Yong Park, Kengo Kinoshita, Motonori Ota, Haruki Nakamura, Seiki Kuramitsu, Mikako Shirouzu, and Shigeyuki Yokoyama
Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
Protein Sci 2003 12: 1621-1632. [Abstract] [Full Text]  

Shalom D. Goldberg, William Iannuccilli, Tuan Nguyen, Jingyue Ju, and Virginia W. Cornish
Identification of residues critical for catalysis in a class C ß-lactamase by combinatorial scanning mutagenesis
Protein Sci 2003 12: 1633-1645. [Abstract] [Full Text] [Supplemental Research Data]  

Sulin Jiang, Andrei Tovchigrechko, and Ilya A. Vakser
The role of geometric complementarity in secondary structure packing: A systematic docking study
Protein Sci 2003 12: 1646-1651. [Abstract] [Full Text]  

Agnieszka S. Juncker, Hanni Willenbrock, Gunnar von Heijne, Søren Brunak, Henrik Nielsen, and Anders Krogh
Prediction of lipoprotein signal peptides in Gram-negative bacteria
Protein Sci 2003 12: 1652-1662. [Abstract] [Full Text]  

Mehmet A. Kilic, Stephen Spiro, and Geoffrey R. Moore
Stability of a 24-meric homopolymer: Comparative studies of assembly-defective mutants of Rhodobacter capsulatus bacterioferritin and the native protein
Protein Sci 2003 12: 1663-1674. [Abstract] [Full Text]  

Katarzyna Koscielska-Kasprzak and Jacek Otlewski
Amyloid-forming peptides selected proteolytically from phage display library
Protein Sci 2003 12: 1675-1685. [Abstract] [Full Text]  

Michelle M. Meyer, Jonathan J. Silberg, Christopher A. Voigt, Jeffrey B. Endelman, Stephen L. Mayo, Zhen-Gang Wang, and Frances H. Arnold
Library analysis of SCHEMA-guided protein recombination
Protein Sci 2003 12: 1686-1693. [Abstract] [Full Text]  

Jennifer Brosius Palenchar, Jennifer M. Crocco, and Roberta F. Colman
The characterization of mutant Bacillus subtilis adenylosuccinate lyases corresponding to severe human adenylosuccinate lyase deficiencies
Protein Sci 2003 12: 1694-1705. [Abstract] [Full Text]  

Mark D. Shenderovich, Ron M. Kagan, Peter N.R. Heseltine, and Kal Ramnarayan
Structure-based phenotyping predicts HIV-1 protease inhibitor resistance
Protein Sci 2003 12: 1706-1718. [Abstract] [Full Text]  

Nidhi Bhutani and Jayant B. Udgaonkar
Folding subdomains of thioredoxin characterized by native-state hydrogen exchange
Protein Sci 2003 12: 1719-1731. [Abstract] [Full Text]  

Lidia Cristian, James D. Lear, and William F. DeGrado
Determination of membrane protein stability via thermodynamic coupling of folding to thiol–disulfide interchange
Protein Sci 2003 12: 1732-1740. [Abstract] [Full Text] [Supplemental Research Data]  

Peter T. Erskine, Leighton Coates, Sanjay Mall, Raj S. Gill, Steve P. Wood, Dean A.A. Myles, and Jon. B. Cooper
Atomic resolution analysis of the catalytic site of an aspartic proteinase and an unexpected mode of binding by short peptides
Protein Sci 2003 12: 1741-1749. [Abstract] [Full Text]  

Jean-Loup Faulon, Ken Sale, and Malin Young
Exploring the conformational space of membrane protein folds matching distance constraints
Protein Sci 2003 12: 1750-1761. [Abstract] [Full Text]  

Veniamin N. Lapko, David L. Smith, and Jean B. Smith
Methylation and carbamylation of human {gamma}-crystallins
Protein Sci 2003 12: 1762-1774. [Abstract] [Full Text]  

Amareth Lim, Tatiana Prokaeva, Mark E. McComb, Lawreen H. Connors, Martha Skinner, and Catherine E. Costello
Identification of S-sulfonation and S-thiolation of a novel transthyretin Phe33Cys variant from a patient diagnosed with familial transthyretin amyloidosis
Protein Sci 2003 12: 1775-1785. [Abstract] [Full Text]  

Darrin A. Lindhout, Angela Thiessen, Dean Schieve, and Brian D. Sykes
High-yield expression of isotopically labeled peptides for use in NMR studies
Protein Sci 2003 12: 1786-1791. [Abstract] [Full Text]  

Christy A. Thomson, Ruggero Tenni, and Vettai S. Ananthanarayanan
Mapping Hsp47 binding site(s) using CNBr peptides derived from type I and type II collagen
Protein Sci 2003 12: 1792-1800. [Abstract] [Full Text]  

FOR THE RECORD:

Andrea Cavalli, Urs Haberthür, Emanuele Paci, and Amedeo Caflisch
Fast protein folding on downhill energy landscape
Protein Sci 2003 12: 1801-1803. [Abstract] [Full Text]  

Mark J. Pallen
Glucoamylase-like domains in the {alpha}- and ß-subunits of phosphorylase kinase
Protein Sci 2003 12: 1804-1807. [Abstract] [Full Text]  

ERRATUM:

CORRECTION
Protein Sci 2003 12: 1808. [Full Text]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.


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