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Contents: April 2002, Volume 11, Issue 4   [Index by Author] 
       INVITED ARTICLE
       REVIEWS
       ARTICLES
       FOR THE RECORD
       ADDENDUM
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INVITED ARTICLE:

Mark R. Chance, Anne R. Bresnick, Stephen K. Burley, Jian-Sheng Jiang, Christopher D. Lima, Andrej Sali, Steven C. Almo, Jeffrey B. Bonanno, John A. Buglino, Simon Boulton, Hua Chen, Narayanan Eswar, Guoshun He, Raymond Huang, Valentin Ilyin, Linda McMahan, Ursula Pieper, Soumya Ray, Marc Vidal, and Li Kai Wang
Structural genomics: A pipeline for providing structures for the biologist
Protein Sci 2002 11: 723-738. [Full Text]  

REVIEWS:

Vladimir N. Uversky
Natively unfolded proteins: A point where biology waits for physics
Protein Sci 2002 11: 739-756. [Abstract] [Full Text]  

ARTICLES:

Nicolas Wolff, Clarisse Deniau, Sylvie Létoffé, Catherine Simenel, Veena Kumar, Igor Stojiljkovic, Cécile Wandersman, Muriel Delepierre, and Anne Lecroisey
Histidine pKa shifts and changes of tautomeric states induced by the binding of gallium-protoporphyrin IX in the hemophore HasASM
Protein Sci 2002 11: 757-765. [Abstract] [Full Text]  

Michael Petukhov, Koichi Uegaki, Noboru Yumoto, and Luis Serrano
Amino acid intrinsic {alpha}-helical propensities III: Positional dependence at several positions of C terminus
Protein Sci 2002 11: 766-777. [Abstract] [Full Text]  

Liskin Swint-Kruse, Christopher Larson, B. Montgomery Pettitt, and Kathleen Shive Matthews
Fine-tuning function: Correlation of hinge domain interactions with functional distinctions between LacI and PurR
Protein Sci 2002 11: 778-794. [Abstract] [Full Text]  

Maris Lapinsh, Alexandrs Gutcaits, Peteris Prusis, Claes Post, Torbjörn Lundstedt, and Jarl E.S. Wikberg
Classification of G-protein coupled receptors by alignment-independent extraction of principal chemical properties of primary amino acid sequences
Protein Sci 2002 11: 795-805. [Abstract] [Full Text]  

Olga Buczek, Katarzyna Koscielska-Kasprzak, Daniel Krowarsch, Michal Dadlez, and Jacek Otlewski
Analysis of serine proteinase–inhibitor interaction by alanine shaving
Protein Sci 2002 11: 806-819. [Abstract] [Full Text]  

Jason F. Kreisberg, Scott D. Betts, Cameron Haase-Pettingell, and Jonathan King
The interdigitated ß-helix domain of the P22 tailspike protein acts as a molecular clamp in trimer stabilization
Protein Sci 2002 11: 820-830. [Abstract] [Full Text]  

John W. Crabb, June O'Neil, Masaru Miyagi, Karen West, and Henry F. Hoff
Hydroxynonenal inactivates cathepsin B by forming Michael adducts with active site residues
Protein Sci 2002 11: 831-840. [Abstract] [Full Text]  

Kendall D. Powell, Thomas E. Wales, and Michael C. Fitzgerald
Thermodynamic stability measurements on multimeric proteins using a new H/D exchange- and matrix-assisted laser desorption/ionization (MALDI) mass spectrometry-based method
Protein Sci 2002 11: 841-851. [Abstract] [Full Text]  

Yunjun Wang and Oleg Jardetzky
Probability-based protein secondary structure identification using combined NMR chemical-shift data
Protein Sci 2002 11: 852-861. [Abstract] [Full Text]  

Kimberly A. Lee, Kimberley B. Craven, Gregory A. Niemi, and James B. Hurley
Mass spectrometric analysis of the kinetics of in vivo rhodopsin phosphorylation
Protein Sci 2002 11: 862-874. [Abstract] [Full Text]  

Ronald L. Woodbury, Simon J.S. Hardy, and Linda L. Randall
Complex behavior in solution of homodimeric SecA
Protein Sci 2002 11: 875-882. [Abstract] [Full Text]  

Ingo P. Korndörfer and Arne Skerra
Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site
Protein Sci 2002 11: 883-893. [Abstract] [Full Text]  

George Miles, Liviu Movileanu, and Hagan Bayley
Subunit composition of a bicomponent toxin: Staphylococcal leukocidin forms an octameric transmembrane pore
Protein Sci 2002 11: 894-902. [Abstract] [Full Text]  

Cheryl L. Wojciechowski, James P. Cardia, and Evan R. Kantrowitz
Alkaline phosphatase from the hyperthermophilic bacterium T. maritima requires cobalt for activity
Protein Sci 2002 11: 903-911. [Abstract] [Full Text]  

Megan L. Peach, Gerald L. Hazelbauer, and Terry P. Lybrand
Modeling the transmembrane domain of bacterial chemoreceptors
Protein Sci 2002 11: 912-923. [Abstract] [Full Text]  

Olga Buczek, Daniel Krowarsch, and Jacek Otlewski
Thermodynamics of single peptide bond cleavage in bovine pancreatic trypsin inhibitor (BPTI)
Protein Sci 2002 11: 924-932. [Abstract] [Full Text]  

Martin Horn, Miroslav Baudys, Zdenek Voburka, Ivan Kluh, Jirí Vondrásek, and Michael Mares
Free-thiol Cys331 exposed during activation process is critical for native tetramer structure of cathepsin C (dipeptidyl peptidase I)
Protein Sci 2002 11: 933-943. [Abstract] [Full Text] [Supplemental Research Data]  

Xiaolong Xu, Qingliang Liu, Huaming Yu, and Yongshu Xie
Ca(II)- and Tb(III)-induced stabilization and refolding of anticoagulation factor I from the venom of Agkistrodon acutus
Protein Sci 2002 11: 944-956. [Abstract] [Full Text]  

Françoise Ochsenbein, Jean-Michel Neumann, Eric Guittet, and Carine Van Heijenoort
Dynamical characterization of residual and non-native structures in a partially folded protein by 15N NMR relaxation using a model based on a distribution of correlation times
Protein Sci 2002 11: 957-964. [Abstract] [Full Text]  

Ara Kahyaoglu and Frank Jordan
Direct proton magnetic resonance determination of the pKa of the active center histidine in thiolsubtilisin
Protein Sci 2002 11: 965-973. [Abstract] [Full Text]  

FOR THE RECORD:

Todd W. Beaman, Kurt W. Vogel, Dale G. Drueckhammer, John S. Blanchard, and Steven L. Roderick
Acyl group specificity at the active site of tetrahydridipicolinate N-succinyltransferase
Protein Sci 2002 11: 974-979. [Abstract] [Full Text]  

Adam L. Rucker and Trevor P. Creamer
Polyproline II helical structure in protein unfolded states: Lysine peptides revisited
Protein Sci 2002 11: 980-985. [Abstract] [Full Text]  

ADDENDUM:

Yury N. Vorobjev and Jan Hermans
Free energies of protein decoys provide insight into determinants of protein stability
Protein Sci 2002 11: 994. [Full Text]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.


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